> For the complete documentation index, see [llms.txt](https://cires.gitbook.io/zarr/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://cires.gitbook.io/zarr/master.md).

# Zarr Cloud Data Conversion

![ecosystem](/files/-MCuBB-aHxF50sx2S4rs)

## Intro

The following chronicles the creation of a Zarr store using water-column sonar data. The goal is to allow users to access the data in a cloud-native format.

### Resources

* <https://cires.gitbook.io/ncei-wcsd-archive/>
* <https://zarr.readthedocs.io/en/stable/tutorial.html>
* <https://drive.google.com/file/d/1qgb5JL_MIaTjv35-49F3EcQvjYts5AG_/view>
* <https://higlass.github.io/higlass-zarr-datafetchers/>

Papers

* <https://www.mdpi.com/2077-1312/7/4/110/htm>
* <https://archimer.ifremer.fr/doc/00503/61441/65160.pdf>
* <https://www.frontiersin.org/articles/10.3389/fmars.2019.00211/full>

### Tutorials

#### 1. Converting Raw EK60 Data to Zarr - Level 00

{% embed url="<https://colab.research.google.com/drive/1KCqqAIOXPxyM_qWLy4MJNRxsEEA9jYHp?usp=sharing>" %}

#### 2. Converting CSV Data to Zarr - Level 01

{% embed url="<https://colab.research.google.com/drive/148bHkmzxR5VifeR5yem98yWWxYEnHnX3?usp=sharing>" %}

Echopype notes:

Nice paper on echopype moving forward: <https://arxiv.org/pdf/2111.00187.pdf>


---

# Agent Instructions
This documentation is published with GitBook. GitBook is the documentation platform designed so that both humans and AI agents can read, navigate, and reason over technical content effectively. Learn more at gitbook.com.

## Querying This Documentation
If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter, and the optional `goal` query parameter:

```
GET https://cires.gitbook.io/zarr/master.md?ask=<question>&goal=<endgoal>
```

`ask` is the immediate question: it should be specific, self-contained, and written in natural language.
`goal` is optional and describes the broader end goal you are ultimately trying to accomplish on behalf of the user. GitBook uses it to tailor the answer towards what is most useful for that goal.

The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.
