Zarr Cloud Data Conversion

ecosystem

Intro

The following chronicles the creation of a Zarr store using water-column sonar data. The goal is to allow users to access the data in a cloud-native format.

Resources

• https://cires.gitbook.io/ncei-wcsd-archive/

• https://zarr.readthedocs.io/en/stable/tutorial.html

• https://drive.google.com/file/d/1qgb5JL_MIaTjv35-49F3EcQvjYts5AG_/view

• https://higlass.github.io/higlass-zarr-datafetchers/

Papers

• https://www.mdpi.com/2077-1312/7/4/110/htm

• https://archimer.ifremer.fr/doc/00503/61441/65160.pdf

• https://www.frontiersin.org/articles/10.3389/fmars.2019.00211/full

Tutorials

1. Converting Raw EK60 Data to Zarr - Level 00

Google Colabcolab.research.google.com

2. Converting CSV Data to Zarr - Level 01

Google Colabcolab.research.google.com

Echopype notes:

Nice paper on echopype moving forward: https://arxiv.org/pdf/2111.00187.pdf